BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F11SP1|AL425164
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig753 1867 0.0
>3x_Contig753
Length = 2743
Score = 1867 bits (940), Expect = 0.0
Identities = 963/970 (99%), Gaps = 2/970 (0%)
Strand = Plus / Plus
Query: 1 aagtggcacctgcaacgatcaaaatagcactgttaacaaataatgcaaaggtgaacaaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 173 aagtggcacctgcaacgatcaaaatagcactgttgacaaataatgcaaaggtgaacaaag 232
Query: 61 tgatggccaattcaaaaatggaatatttcatggcatacttgatagcactatttgtgggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tgatggccaattcaaaaatggaatatttcatggcatacttgatagcactatttgtgggtt 292
Query: 121 gataattgaagtatcttctttccctgatgacttcgatatcttccttttcctttacagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gataattgaagtatcttctttccctgatgacttcgatatcttccttttcctttacagcag 352
Query: 181 agtgagtatcttcgg-tttcttcaatgacattgtcttcatcttcttctgccaacaaatcg 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtgagtatcttcgggtttcttcaatgacattgtcttcatcttcttctgccaacaaatcg 412
Query: 240 tagtaaccatggtcaacgtcatactctaataatcttggttgaactaaaccagaacccaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tagtaaccatggtcaacgtcatactctaataatcttggttgaactaaaccagaacccaag 472
Query: 300 aagagtgaatgaggcatgacagtggcaccgagaatggaggtagcggtgtacataccgtta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aagagtgaatgaggcatgacagtggcaccgagaatggaggtagcggtgtacataccgtta 532
Query: 360 tgttcaaacatttgtttagaaggaacaaaacctctgaaaatatgtcccactggagttttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgttcaaacatttgtttagaaggaacaaaacctctgaaaatatgtcccactggagttttt 592
Query: 420 ggaatgtaagccaactcaacacagaagcagataacaacaccaaagacaagtagggcaaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ggaatgtaagccaactcaacacagaagcagataacaacaccaaagacaagtagggcaaca 652
Query: 480 gcgtactcgaacattctgacgaatctcatggatgaagaacctggcttgtmagcgatcaam 539
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 653 gcgtactcgaacattctgacgaatctcatggatgaagaacctggcttgtaagcgatcaaa 712
Query: 540 acgaataagacatcgatacaggtaataaccacacccgctggtaatgggattcttagcaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 acgaataagacatcgatacaggtaataaccacacccgctggtaatgggattcttagcaag 772
Query: 600 atattcaatgcaactgcagtaccaataacttcagcaacatctgttgcaatgatagcacat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 atattcaatgcaactgcagtaccaataacttcagcaacatctgttgcaatgatagcacat 832
Query: 660 tctgcaaacacataaatggtcaaattcaaccatttgggcaggtgcttcttgcaagccctt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tctgcaaacacataaatggtcaaattcaaccatttgggcaggtgcttcttgcaagccctt 892
Query: 720 gaaagatctaatcccgtcacagaacctagtttgatacatagagattgtaagaagatagca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 gaaagatctaatcccgtcacagaacctagtttgatacatagagattgtaagaagatagca 952
Query: 780 ataatattggaaaccaacacaatacaaagtaaagagaactcgttagaagcaccagcacta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 ataatattggaaaccaacacaatacaaagtaaagagaactcgttagaagcaccagcacta 1012
Query: 840 acgtcagtagcgtaattacctggatccatataggcaacagagaccatcaaacccggtcca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 acgtcagtagcgtaattacctggatccatataggcaacagagaccatcaaacccggtcca 1072
Query: 900 acaaatctcatgtattttctcaacacgtcttgtacggggccaaawaa-cctctcttctta 958
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 1073 acaaatctcatgtattttctcaacacgtcttgtacggagccaaaaaaccctctcttctta 1132
Query: 959 tcttcggcgg 968
||||||||||
Sbjct: 1133 tcttcggcgg 1142
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7714
Number of Sequences: 1807
Number of extensions: 7714
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)